PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY05440.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 244aa MW: 28162.3 Da PI: 5.5805 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.7 | 1.1e-19 | 36 | 88 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++f++eq++ Le Fe+++++ +++ +LA+ lgL+ rqV +WFqNrRa++k RDY05440.1 36 KRRFSDEQIRSLECIFESESKLEPRKKMQLARDLGLQPRQVAIWFQNRRARWK 88 568*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 120.6 | 8.2e-39 | 34 | 125 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 e+krr+s+eq+++LE Fe+e+kLep++K++lar+Lglqprqva+WFqnrRAR+k+k++E++y++Lk++yd+l+++ e+L+ke+e+L+ e + RDY05440.1 34 ENKRRFSDEQIRSLECIFESESKLEPRKKMQLARDLGLQPRQVAIWFQNRRARWKSKRIEQEYRKLKDEYDNLASRFESLKKEKESLQLEFQ 125 58*************************************************************************************97766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MMEGEENIQA SSKGKNVENF TCLEAPRKKN KKIENKRRFS DEQIRSLECI FESESKLEPR 60 KKMQLARDLG LQPRQVAIWF QNRRARWKSK RIEQEYRKLK DEYDNLASRF ESLKKEKESL 120 QLEFQKLSDL VVTSQSHDGG REDKGGKENS IEDGGSGSGY SSWKPEAKPR FSNEGLEERI 180 GVCSDDQNEN SIIRSEKSED KEHQQILRMD DDHAEMPLAS LEKWYSSVDP SGILDQSCSS 240 SQCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 2e-41 | HD-ZIP family protein |