PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY05378.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | SBP | ||||||||
Protein Properties | Length: 217aa MW: 24148.7 Da PI: 8.668 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 131.1 | 3.8e-41 | 97 | 173 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cq+e C adl+ ak+yhrrhkvCe hskap v+v+gl+qrfCqqCsrfhel efDe+krsCrrrLa+hn+rrrk++a RDY05378.1 97 CQAEMCGADLTVAKRYHRRHKVCEPHSKAPFVIVAGLRQRFCQQCSRFHELAEFDEAKRSCRRRLARHNQRRRKSNA 173 **************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
KQGSTRFLAP AFSSSSSSSS LSSLTMEIKT REERMQVSIE KVRRHGTVEV EDNEEEEEDE 60 SVAGGEGGLA EDERKKGGGG SWKRGSSGGG GVSPPSCQAE MCGADLTVAK RYHRRHKVCE 120 PHSKAPFVIV AGLRQRFCQQ CSRFHELAEF DEAKRSCRRR LARHNQRRRK SNAETCNEGC 180 SSSKGQHPTE SHCRNADDWG RIQMNMARNS GYNSFHI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 166 | 171 | QRRRKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33810.1 | 1e-27 | SBP family protein |