PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY04975.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 577aa MW: 62173.9 Da PI: 6.5664

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY04975.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28	3.9e-09	390	437	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq RDY04975.1 390 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 437 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MENQFFLNAG VPPQLHFEPS PHPCPPSWQS LSSAMDVQVT VLNCSTEQQT QDCFYTPTWD 60 KSTDHGLQFD SALSSMVSSP AASNSNMSSD NFVIRELIGK LGNIGGGGGG GGSDEISPHS 120 QPLVGASSYI NGNNSTNTSC YSTPLSSPPK VKNMNKNKIP TTVVSHLVKE VMPPSLGTSM 180 SLNSSVAEFS ADPGFAERAA KFSCFGSRSF NGRTTQLGLN NAELTQRPSP LVENGKLPRV 240 SSSPSLKVLG SQMGNHESNN SPLQDLMEVA NSQEESTISE HTPNGDTGVK PTTYVNSRKR 300 KGPSKGKAKE TSTSINPPMA GEASEDSNAK RSKPNEGEGN ENGQVKAEEE SKGGASNAND 360 EKQNKSNSKP PEPPKDYIHV RARRGQATDS HSLAERVRRE KISERMKLLQ DLVPGCNKVT 420 GKALMLDEII NYVQSLQRQV EFLSMKLASV NTRLDFSIES LISKDIFQSN NTLAHPIFPL 480 DSSAPAFYGQ HPQPNPAIHN NIPNGTVTHN SVDPLDTALC QLPHLNGFNE GGSQYPITFS 540 EDDLHTIVQM GFGQTANRKT PIQPPQSFNG SNQISVI

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MENQFFLNAG VPPQLHFEPS PHPCPPSWQS LSSAMDVQVT VLNCSTEQQT QDCFYTPTWD  60
KSTDHGLQFD SALSSMVSSP AASNSNMSSD NFVIRELIGK LGNIGGGGGG GGSDEISPHS  120
QPLVGASSYI NGNNSTNTSC YSTPLSSPPK VKNMNKNKIP TTVVSHLVKE VMPPSLGTSM  180
SLNSSVAEFS ADPGFAERAA KFSCFGSRSF NGRTTQLGLN NAELTQRPSP LVENGKLPRV  240
SSSPSLKVLG SQMGNHESNN SPLQDLMEVA NSQEESTISE HTPNGDTGVK PTTYVNSRKR  300
KGPSKGKAKE TSTSINPPMA GEASEDSNAK RSKPNEGEGN ENGQVKAEEE SKGGASNAND  360
EKQNKSNSKP PEPPKDYIHV RARRGQATDS HSLAERVRRE KISERMKLLQ DLVPGCNKVT  420
GKALMLDEII NYVQSLQRQV EFLSMKLASV NTRLDFSIES LISKDIFQSN NTLAHPIFPL  480
DSSAPAFYGQ HPQPNPAIHN NIPNGTVTHN SVDPLDTALC QLPHLNGFNE GGSQYPITFS  540
EDDLHTIVQM GFGQTANRKT PIQPPQSFNG SNQISVI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-105	bHLH family protein