PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY04431.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 539aa MW: 59572.6 Da PI: 5.4419

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY04431.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4e-17	108	155	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTt Ed l d+v+++G g+W+++ r g++R++k+c++rw ++l RDY04431.1 108 KGPWTTAEDAVLMDYVTKHGEGNWNAVQRNTGLNRCGKSCRLRWANHL 155 79******************************************9986 PP
2	Myb_DNA-binding	53.2	6.7e-17	161	204	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+++teE++l+vd+++q+G++ W++ a+ ++ gRt++++k++w++ RDY04431.1 161 KGAFSTEEEKLIVDLHAQFGNK-WARMAALLP-GRTDNEIKNYWNT 204 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MEHIVVGLEE LTTGSESYSE VYAQRFCCHQ PPPPFAALVP TFAAATTTIT NWNLMEGMAS 60 INDAANGENG LLAMFGGNEN GVGVSGGGGG SGSGGQGGGN VEESSLKKGP WTTAEDAVLM 120 DYVTKHGEGN WNAVQRNTGL NRCGKSCRLR WANHLRPNLK KGAFSTEEEK LIVDLHAQFG 180 NKWARMAALL PGRTDNEIKN YWNTRIKRRQ RQGLPLYSDE KDQRRPTTPP TSTPTTTTSS 240 PCLTPTSSNP NNFEFFNQNQ NQNQHQQHQH TFLDPSPLPF SSSSSFTFQR PAPMLCTPLR 300 FKRYRASPSY NLPEAPSQFP HLDGFRFPVS GFSQFFQPSL LDSSSSSTFT PKLDFPSNQF 360 YRPPPQDPEI KFDFDFNDPS FQNSTGLLGD LLLEAQALAS GQNSKKRTYL SLNEGNDMFN 420 ACQSFEDLPP SSLYCSSTSE PKPKEEVQDL SKFMNEDYSS LLTVIPSSNM QGHEWHNNNN 480 NNNSAPEVSN VQSSGSGMTD DNFGLDIKPI ASLFPLTNTT NHNDQNQGYY SWDNLPGLC

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MEHIVVGLEE LTTGSESYSE VYAQRFCCHQ PPPPFAALVP TFAAATTTIT NWNLMEGMAS  60
INDAANGENG LLAMFGGNEN GVGVSGGGGG SGSGGQGGGN VEESSLKKGP WTTAEDAVLM  120
DYVTKHGEGN WNAVQRNTGL NRCGKSCRLR WANHLRPNLK KGAFSTEEEK LIVDLHAQFG  180
NKWARMAALL PGRTDNEIKN YWNTRIKRRQ RQGLPLYSDE KDQRRPTTPP TSTPTTTTSS  240
PCLTPTSSNP NNFEFFNQNQ NQNQHQQHQH TFLDPSPLPF SSSSSFTFQR PAPMLCTPLR  300
FKRYRASPSY NLPEAPSQFP HLDGFRFPVS GFSQFFQPSL LDSSSSSTFT PKLDFPSNQF  360
YRPPPQDPEI KFDFDFNDPS FQNSTGLLGD LLLEAQALAS GQNSKKRTYL SLNEGNDMFN  420
ACQSFEDLPP SSLYCSSTSE PKPKEEVQDL SKFMNEDYSS LLTVIPSSNM QGHEWHNNNN  480
NNNSAPEVSN VQSSGSGMTD DNFGLDIKPI ASLFPLTNTT NHNDQNQGYY SWDNLPGLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	4e-64	MYB family protein