PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY03653.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 769aa MW: 85587.9 Da PI: 8.9989

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY03653.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.5	4.9e-05	161	183	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 kC++C++ F ++ n++rHir H RDY03653.1 161 KCNKCSREFCSPINYRRHIRIqH 183 7*******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 769 aa Download sequence
RPNRNSTSRR NVFRPTTTAA CGKERESSLS YAIFSRFLND FPSIQTLSNP SQPIAVLLWI 60 VTTESVRPPS DLFLVLPLCG ILQSFLMPVA KLTASGTPNF TKTDDGNDSL DTIIRQAIGR 120 EPFLSFPRAG DSPVQWIQLL HDALDQQGWP LLSPVKVQLQ KCNKCSREFC SPINYRRHIR 180 IQHRLKKLDK DSKKNRDLLG AYWDKLSIEE AKEVVSFKNV MLEEVPGSSI LEALATLRKQ 240 GFSFPQYYLR AGSALLNIVQ FRPSSFPISS QELFSILDDS SEKTFLGGSA VSMQRYVFDG 300 EAGKIGLEPK NLVACTGFLL EQKLVKAWLA DKDAEALRCQ KLLVEEEEAA QKRKAEILER 360 KRQKKLRQKE HKARERLEDD SEIKENTSCT GEDVSPAEAS VVTCDFEAHN QEIFADRSPP 420 LHVTSHCLVD EVVEGDRVSG YDCDTDQYIE RQTSRGHNRR RTMAARWQGL PKSQWARANG 480 SHACQNSQMS KLGVVQKHGT NRDQRAAPIV NGSKFWSRKP KPETNGVFLK AKLQKEPDKG 540 KNHEVLIGSV SVSLGNCSHS ESNSVAPQRD CLVENLAKQN TAQEKLGKLD FSQGGNARLT 600 VKLWRPVSQH GTKDQLPLQN GGTEADVING KYDQNLSSQS SLRLCSIDGS DIGLGDKFSH 660 TGAKVDSESL GLSSHAAKAF LGQRWKEAIS SNHVRLVVTP DFELLGGQQV QDCEFAACQS 720 SNVERCSIRA DAENRLPEET SSGVAKSKPR TKPEKGMKIK YIPKQKAAT

Sequence ? help Back to Top

Protein Sequence Length: 769 aa Download sequence

RPNRNSTSRR NVFRPTTTAA CGKERESSLS YAIFSRFLND FPSIQTLSNP SQPIAVLLWI  60
VTTESVRPPS DLFLVLPLCG ILQSFLMPVA KLTASGTPNF TKTDDGNDSL DTIIRQAIGR  120
EPFLSFPRAG DSPVQWIQLL HDALDQQGWP LLSPVKVQLQ KCNKCSREFC SPINYRRHIR  180
IQHRLKKLDK DSKKNRDLLG AYWDKLSIEE AKEVVSFKNV MLEEVPGSSI LEALATLRKQ  240
GFSFPQYYLR AGSALLNIVQ FRPSSFPISS QELFSILDDS SEKTFLGGSA VSMQRYVFDG  300
EAGKIGLEPK NLVACTGFLL EQKLVKAWLA DKDAEALRCQ KLLVEEEEAA QKRKAEILER  360
KRQKKLRQKE HKARERLEDD SEIKENTSCT GEDVSPAEAS VVTCDFEAHN QEIFADRSPP  420
LHVTSHCLVD EVVEGDRVSG YDCDTDQYIE RQTSRGHNRR RTMAARWQGL PKSQWARANG  480
SHACQNSQMS KLGVVQKHGT NRDQRAAPIV NGSKFWSRKP KPETNGVFLK AKLQKEPDKG  540
KNHEVLIGSV SVSLGNCSHS ESNSVAPQRD CLVENLAKQN TAQEKLGKLD FSQGGNARLT  600
VKLWRPVSQH GTKDQLPLQN GGTEADVING KYDQNLSSQS SLRLCSIDGS DIGLGDKFSH  660
TGAKVDSESL GLSSHAAKAF LGQRWKEAIS SNHVRLVVTP DFELLGGQQV QDCEFAACQS  720
SNVERCSIRA DAENRLPEET SSGVAKSKPR TKPEKGMKIK YIPKQKAAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	359	366	ERKRQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-140	C2H2 family protein