PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY03405.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 361aa MW: 40310.5 Da PI: 7.5465

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY03405.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.1	8.8e-10	171	218	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ +L++l+P + +k Ka +L + ++Y++sLq RDY03405.1 171 SHSLAERVRREKISERMKTLQRLVPGC----DKVTGKALVLDEIINYVQSLQ 218 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MAAFSSQYYH PFLVDSTCFS ISTPSINNVS SFGEQPLINT PPSPYHFHNI HHETSSVDQS 60 SKVTICDTDP SVLKNHSPET SMVVDKLEKG EQVTQNVIPM EKKRRARNGS SLSSPLSKDS 120 TEGGNKKQKK SNGGVKGDNK PKEAKDEKKG PEELPAGYIH VRARRGQATD SHSLAERVRR 180 EKISERMKTL QRLVPGCDKV TGKALVLDEI INYVQSLQNQ VELFNIVHCL QCLNLCILLQ 240 FLSMKLASVN PMLFDLAMDI DTLLVRPDMK LNNIASPSSL PCVPQCRPDQ AIAFADTTTN 300 TSTFPIANND YLLDHSSSLF LQGQRPNVFF EYTGGQFWDV EDQRQRFLHP YGFSNNSGSF 360 N

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MAAFSSQYYH PFLVDSTCFS ISTPSINNVS SFGEQPLINT PPSPYHFHNI HHETSSVDQS  60
SKVTICDTDP SVLKNHSPET SMVVDKLEKG EQVTQNVIPM EKKRRARNGS SLSSPLSKDS  120
TEGGNKKQKK SNGGVKGDNK PKEAKDEKKG PEELPAGYIH VRARRGQATD SHSLAERVRR  180
EKISERMKTL QRLVPGCDKV TGKALVLDEI INYVQSLQNQ VELFNIVHCL QCLNLCILLQ  240
FLSMKLASVN PMLFDLAMDI DTLLVRPDMK LNNIASPSSL PCVPQCRPDQ AIAFADTTTN  300
TSTFPIANND YLLDHSSSLF LQGQRPNVFF EYTGGQFWDV EDQRQRFLHP YGFSNNSGSF  360
N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	102	129	KKRRARNGSSLSSPLSKDSTEGGNKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	2e-46	bHLH family protein