PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY03040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | SBP | ||||||||
Protein Properties | Length: 142aa MW: 16316.3 Da PI: 8.7741 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 125.3 | 2.4e-39 | 56 | 131 | 2 | 77 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cq+++C +dls ak+y+rrhk+C+ hskapvvlvs ++qrfCqqCsrfhel efD +krsCr rL++hnerrrk++ RDY03040.1 56 CQADECGMDLSMAKSYNRRHKICDRHSKAPVVLVSSTRQRFCQQCSRFHELAEFDGNKRSCRIRLSGHNERRRKAR 131 **************************************************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MFSIGKTACE EEKDKDGDER EVEEAVNEDN KEENIRIKVV CGKDSRKASS SRHSFCQADE 60 CGMDLSMAKS YNRRHKICDR HSKAPVVLVS STRQRFCQQC SRFHELAEFD GNKRSCRIRL 120 SGHNERRRKA RADLSLGGYV SR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33810.1 | 4e-32 | SBP family protein |