PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY02874.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | bHLH | ||||||||
Protein Properties | Length: 191aa MW: 21882.3 Da PI: 9.6557 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 22.4 | 2.1e-07 | 18 | 68 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-..STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskK..lsKaeiLekAveYIksL 54 + +E++RR +++s ++L +llP++ k+++ K l e L +A ++I ++ RDY02874.1 18 KTIEKNRRIHMKSLCHQLASLLPPNLKPSKSKlmLGQQEQLDLAARHIEQM 68 689*********************655555554677778888888888886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MKRRLAGTSS ESSKLDRKTI EKNRRIHMKS LCHQLASLLP PNLKPSKSKL MLGQQEQLDL 60 AARHIEQMRD RIEKLKRQKE QVMSNQSNDR KTLNSIVDYK LPVLELRDLG SGIEVMLVSG 120 LNKTFMLYEV ISVLEEEGAE VVNASFSTVG DKIFYVVHAQ VKISRVGVET TRVYDRLQEF 180 IAPLEIWSED V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 1e-25 | bHLH family protein |