PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY02752.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | GRF | ||||||||
Protein Properties | Length: 323aa MW: 36598.6 Da PI: 8.3961 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 68.5 | 8.8e-22 | 51 | 88 | 7 | 44 |
WRC 7 CrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 CrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e RDY02752.1 51 CRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 88 ***********************************987 PP | |||||||
2 | QLQ | 57.1 | 5.6e-20 | 8 | 42 | 2 | 36 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT++Q+q+L++Q+l+yKy+a++ +Pp+Ll+ i+ RDY02752.1 8 PFTPSQWQELEHQALIYKYMASGISIPPDLLFTIK 42 8******************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MNGRNRFPFT PSQWQELEHQ ALIYKYMASG ISIPPDLLFT IKRSYFDSPL CRRTDGKKWR 60 CSKEAYPDSK YCERHMHRGK NRSRKPVEVL KAATTTTITN ASTQQAISSI TKSNNTLSPL 120 ASSETTQHQQ HSCYGSSFLY HHPPSRSSGI GLSFEDNSAP LFLDTGSCSH SNTDCRYVYG 180 EKEEVDEHAF FTEPCGIMKS FSASSMDESW QLTPLTMSSS SSSSKQRSSF GLSSDYSHLQ 240 LQSHSKQQEQ QDRGCYMLGG QLVKEEPQKT VHRFFDEWPH KGRGGSWLDL DDKSSTTQLS 300 ISIPTSSHDF PTFSSRTHHV FKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 2e-35 | GRF family protein |