PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY02476.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 256aa MW: 28066.1 Da PI: 6.6759 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.1 | 3e-20 | 25 | 75 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr ++ +gr++AeIrdp + ++r++lg+f+taeeAa+a++ a++ l+g RDY02476.1 25 PRYRGVRKRP-WGRFAAEIRDPLK---KARVWLGTFDTAEEAARAYDTAARTLRG 75 68********.**********743...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MGGGGTAAAV EIGEAVSRPV FFKEPRYRGV RKRPWGRFAA EIRDPLKKAR VWLGTFDTAE 60 EAARAYDTAA RTLRGPKAKT NFSLSPPLYN PDPFSDHRYF AGTGAGEAFH NHRRPTSSGM 120 SSTVESFSGP RPAGPPAPAP AASRRYPRTP PVVPEDCRSD CDSSSSVVDD GDGDNVASSF 180 RRQPLPFDLN ALPLDDADVA NNGGVDDMFC TGLDHFEGLG DFCWWNNFQA WGQVRSEHKL 240 ELKRKEKADG EISWFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 4e-30 | ERF family protein |