PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY02305.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

CO-like

Protein Properties

Length: 383aa MW: 42977.3 Da PI: 6.4469

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY02305.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	29.1	2e-09	16	59	3	39
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39 +r C+ + +k+++++C ++ +lC+ C ++ H+ H+v RDY02305.1 16 ARACDSCIRKRARWYCAADDAFLCQACDSSVHSAnplarrhHRV 59 578*****************************668888886655 PP
2	CCT	68.2	2.1e-23	327	370	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk+a RDY02305.1 327 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 370 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MTSTKNEVNA VGAKTARACD SCIRKRARWY CAADDAFLCQ ACDSSVHSAN PLARRHHRVR 60 LKIVSHNDCA RAWHRGFTKK PRTPRHANNK HANKASSNPF DVVPEDTNSN EESVEPEQLL 120 FRVPVCATPP SHEQATGVTE ESLFLKSEIE IAEFAADVES LLGTGLESEF VGMEELGFVG 180 NELEEGYASW ECCVGGGNVK VEEEMKGREE AFELGFDCDD DEENVALTCE GLDESKVGEI 240 HNNGGEFEEN DEAKRKKILL LRLDYEAVIT AWASQKSPWT TGDKPDLGTH LCWPHCTVPF 300 MGACGVEFHY PYGELFGCHS AMADGGREAR VSRYREKRRT RLFSKKIRYE VRKLNAEKRP 360 RMKGRFVKRA SFVAPPTFPL VNK

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MTSTKNEVNA VGAKTARACD SCIRKRARWY CAADDAFLCQ ACDSSVHSAN PLARRHHRVR  60
LKIVSHNDCA RAWHRGFTKK PRTPRHANNK HANKASSNPF DVVPEDTNSN EESVEPEQLL  120
FRVPVCATPP SHEQATGVTE ESLFLKSEIE IAEFAADVES LLGTGLESEF VGMEELGFVG  180
NELEEGYASW ECCVGGGNVK VEEEMKGREE AFELGFDCDD DEENVALTCE GLDESKVGEI  240
HNNGGEFEEN DEAKRKKILL LRLDYEAVIT AWASQKSPWT TGDKPDLGTH LCWPHCTVPF  300
MGACGVEFHY PYGELFGCHS AMADGGREAR VSRYREKRRT RLFSKKIRYE VRKLNAEKRP  360
RMKGRFVKRA SFVAPPTFPL VNK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	338	354	RRTRLFSKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	7e-90	CO-like family protein