PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY01869.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 384aa MW: 41476 Da PI: 7.9893

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY01869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.9	7.3e-13	312	357	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L +AveYIk+Lq RDY01869.1 312 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKDLQ 357 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MDSHTHHHQG YQPNQSSSGL LRFRSAPTSL LSNLAPSFAT YAGDEAVASS SFQDLEANHK 60 GSFKALSSMS SHKGYGAGLP PHYPRHGSSS AAATSSSAMD ASYGLVASMG MDHEPSHKGF 120 ASNLLRQSSS PAGLFSNNNI SFQNGFATMK GVGNYGGVNG SNGELSPCIN RLKNQISFSP 180 RNASSLGMLS QISEIGSEDI EATSPDDDGR HGGSGTGDAQ HYGPGFPYGS WNDTPQLSEN 240 LSGLKRGRSG NEKMFSDVQN GELGNQVNIL SHHLSLPKTS AEMITMEKLL QFPDSVPCKI 300 RAKRGCATHP RSIAERVRRT RISERMRKLQ ELVPNMDKQT NTADMLDLAV EYIKDLQEQF 360 KTLSDKRANC KCISMQKEDT NQIA

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MDSHTHHHQG YQPNQSSSGL LRFRSAPTSL LSNLAPSFAT YAGDEAVASS SFQDLEANHK  60
GSFKALSSMS SHKGYGAGLP PHYPRHGSSS AAATSSSAMD ASYGLVASMG MDHEPSHKGF  120
ASNLLRQSSS PAGLFSNNNI SFQNGFATMK GVGNYGGVNG SNGELSPCIN RLKNQISFSP  180
RNASSLGMLS QISEIGSEDI EATSPDDDGR HGGSGTGDAQ HYGPGFPYGS WNDTPQLSEN  240
LSGLKRGRSG NEKMFSDVQN GELGNQVNIL SHHLSLPKTS AEMITMEKLL QFPDSVPCKI  300
RAKRGCATHP RSIAERVRRT RISERMRKLQ ELVPNMDKQT NTADMLDLAV EYIKDLQEQF  360
KTLSDKRANC KCISMQKEDT NQIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	2e-94	bHLH family protein