PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY01560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | NAC | ||||||||
Protein Properties | Length: 246aa MW: 28094.6 Da PI: 8.9638 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 152.4 | 2.1e-47 | 14 | 145 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF+Ptdeelv +yLk kv + +l++ ++i+e++++k++PwdLp+ + ++ +++e yfFs+++ ky++g+r nr+tk gyWkatg+dk+++++ RDY01560.1 14 LPPGFRFQPTDEELVFQYLKCKVFSFPLPA-SIIPEINVCKHDPWDLPEvC-SGncdDTQERYFFSRKEGKYRNGNRMNRTTKCGYWKATGSDKRITCS 110 79****************************.89***************533.2224355589***********************************99 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ vg++ktL+fy+g++p+g++tdWv+heyrl RDY01560.1 111 tcNNGIVGIRKTLTFYEGKSPRGSRTDWVLHEYRL 145 888888***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MEKLNFGKNG VSKLPPGFRF QPTDEELVFQ YLKCKVFSFP LPASIIPEIN VCKHDPWDLP 60 EVCSGNCDDT QERYFFSRKE GKYRNGNRMN RTTKCGYWKA TGSDKRITCS TCNNGIVGIR 120 KTLTFYEGKS PRGSRTDWVL HEYRLLSLQT DACNSSHKYV NEIGEWVVCR LWMKKRSIEN 180 DGSATESHQK HRQKRVKSGA RLFDYMMVGN THSSTSSSCS SSSSTNIIEV SSHVSDHEQT 240 SAYAHF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 7e-67 | NAC family protein |