PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY01403.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family RAV
Protein Properties Length: 289aa    MW: 32994.3 Da    PI: 8.6943
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY01403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.11e-081965254
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54
                ++kGV    ++g W A+I+       + +r++lg+f ++ eAa a++ a  kl+
  RDY01403.1 19 KFKGVV-PQQNGNWGAQIYA------NhQRIWLGTFKSEREAAMAYDSAGIKLR 65
                789996.666999****999......44**********99*******9988776 PP
2B3841.3e-26137233188
                 EEEE-..-HHHHTT-EE--HHH.HTT..........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                 f+k+ltpsdv+k++rlv+pkk+a ++          gg+   +++++++d+  r W+++++y+k+s++yv+t+GW++Fvk+++Lk +D++ F + +r+
  RDY01403.1 137 FQKELTPSDVGKLNRLVIPKKHAVTYfpyvcgsetdGGV-GADVEVVFYDKLMRLWKFRYCYWKSSQSYVFTRGWNRFVKDKKLKPKDVIAFFMCERK 233
                 99*****************************99996444.6889**********************************************99765554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MISNTCGEIK NAETSSFQKF KGVVPQQNGN WGAQIYANHQ RIWLGTFKSE REAAMAYDSA  60
GIKLRSRESH RNFPWNNQTV QESQFQSHYS AETVLTMIRD GTYASNFATF LSTRETQGTP  120
KHISVKGEEG FCCSQLFQKE LTPSDVGKLN RLVIPKKHAV TYFPYVCGSE TDGGVGADVE  180
VVFYDKLMRL WKFRYCYWKS SQSYVFTRGW NRFVKDKKLK PKDVIAFFMC ERKDGDGHAF  240
ALIDVIYNSD TKLDLKQQQV CCSEDQEMGD GKDNLNAQKG FRLFGVSIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50680.15e-98RAV family protein