PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDY01026.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | Dof | ||||||||
Protein Properties | Length: 193aa MW: 21542.6 Da PI: 10.6409 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 127.5 | 4.1e-40 | 16 | 76 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++lkcprC+stntkfCy+nny+lsqPr+fCk+CrryWtkGGalrn+PvGgg+rkn k+s RDY01026.1 16 EQEQLKCPRCESTNTKFCYFNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKNAKRS 76 57899****************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MQDPTVFQMM KPSFPEQEQL KCPRCESTNT KFCYFNNYNL SQPRHFCKNC RRYWTKGGAL 60 RNIPVGGGTR KNAKRSTNTK RTVSSAPLPE PDPTRICPDP VGAGSFSSLL ASSGLLEGLN 120 STGSNLKTVQ TEVFGENVSS GRNPGLDMQH GNAQSFLSMQ NDMNVVVVRL FSISSRRWRV 180 DKVLRKSVVH VRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 1e-41 | Dof family protein |