PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY00814.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 571aa MW: 61366.9 Da PI: 9.962

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY00814.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16	3.5e-05	113	135	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H RDY00814.1 113 FICEICNKGFQRDQNLQLHRRGH 135 89*******************88 PP
2	zf-C2H2	13.7	0.00018	189	211	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ RDY00814.1 189 WKCEKCSKKYAVQSDWKAHTKTC 211 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MKSNKRETRS PAVGSSCFAL KLGCLLLLTA LPIATNSNTP QIFPFPFSNM QMMPGDPFSL 60 STSIGAFTQE QNTNPNPKPN PPPKKKRNLP GTPDPDAEVI ALSPKTLMAT NRFICEICNK 120 GFQRDQNLQL HRRGHNLPWK LRQRSNKEVR KKVYICPEQT CVHHDPARAL GDLTGIKKHF 180 SRKHGEKKWK CEKCSKKYAV QSDWKAHTKT CGTREYKCDC GTLFSRKDSF ITHRAFCDAL 240 AEESARLTSV TTTNLNFKSE EGSNVMNSQQ QQQHGLGHGL IAAQGLHQNV SGISQFGPPG 300 FRLDFNGMEQ QRPSLSLWLN QGNHNNNVNN SNNAPDVGPN YMSSCSAEIV QMAQANALMG 360 SSSMVSNFGV PPGSSSTGAN LSLSSIPIGK RGEGSGTVVD LASIYSEGQN KQSKPASPMS 420 ATALLQKAAQ MGSTRNTNPS IFSGSFGSVI NSPNSSQTTS LNNNNGSAAM MLPSNTTTAT 480 DFSSLTHSSN TFDQLVMQAN GGLQTEPVKL KLHSNAVEHN FTRDFLGVSG GGGGGGGRGG 540 GAGPQFLPQE LAKFASLGSP MGLSQFTSNH Q

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MKSNKRETRS PAVGSSCFAL KLGCLLLLTA LPIATNSNTP QIFPFPFSNM QMMPGDPFSL  60
STSIGAFTQE QNTNPNPKPN PPPKKKRNLP GTPDPDAEVI ALSPKTLMAT NRFICEICNK  120
GFQRDQNLQL HRRGHNLPWK LRQRSNKEVR KKVYICPEQT CVHHDPARAL GDLTGIKKHF  180
SRKHGEKKWK CEKCSKKYAV QSDWKAHTKT CGTREYKCDC GTLFSRKDSF ITHRAFCDAL  240
AEESARLTSV TTTNLNFKSE EGSNVMNSQQ QQQHGLGHGL IAAQGLHQNV SGISQFGPPG  300
FRLDFNGMEQ QRPSLSLWLN QGNHNNNVNN SNNAPDVGPN YMSSCSAEIV QMAQANALMG  360
SSSMVSNFGV PPGSSSTGAN LSLSSIPIGK RGEGSGTVVD LASIYSEGQN KQSKPASPMS  420
ATALLQKAAQ MGSTRNTNPS IFSGSFGSVI NSPNSSQTTS LNNNNGSAAM MLPSNTTTAT  480
DFSSLTHSSN TFDQLVMQAN GGLQTEPVKL KLHSNAVEHN FTRDFLGVSG GGGGGGGRGG  540
GAGPQFLPQE LAKFASLGSP MGLSQFTSNH Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	140	152	KLRQRSNKEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03150.1	1e-105	C2H2 family protein