PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY00344.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB_related

Protein Properties

Length: 425aa MW: 47727.1 Da PI: 8.1687

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY00344.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.3	2.7e-11	368	416	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 ++W++ E+e l+ av+++G+g+Wk+I + + Rt+ ++k++w+++ RDY00344.1 368 KKWSQLEEETLKTAVNKFGKGNWKLILNSHRdifEERTEVDLKDKWRNL 416 58******************************9**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MEGGDVGRWA LEFLLGNPLA DSNPIKKVIR KIPVSDADSR LKKTLLLKTL QDHLSSVSIS 60 EPVLQTLELL EELHRRDASP VTPAMSTAYC AVAVDCTLKY LPLEPHHHNP AYLSAVNRIW 120 RGRVSHMNGS ASGEGSLLFS PELKRWKIDI EASLSDSQVR ERLASIVDTR RDAIIKLKLY 180 LAEEWANLGP SFLQVVASMH LNKAPIANHS EAQQHQEREI QKCSSAAAEE VHPSITIEVP 240 KVGECSSVEL QTLVKDSLLN SSEVNEEVHV QKQSTHADVP CPNSVNDNDA DLMEEQQTSV 300 PQNHNHGPSL MEKNSTARTY EWDDSIDGLQ GGTSNRASTI HLPSPKGRKL SPLKKYVSAK 360 ITKRRKAKKW SQLEEETLKT AVNKFGKGNW KLILNSHRDI FEERTEVDLK DKWRNLTRRK 420 CNYKI

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MEGGDVGRWA LEFLLGNPLA DSNPIKKVIR KIPVSDADSR LKKTLLLKTL QDHLSSVSIS  60
EPVLQTLELL EELHRRDASP VTPAMSTAYC AVAVDCTLKY LPLEPHHHNP AYLSAVNRIW  120
RGRVSHMNGS ASGEGSLLFS PELKRWKIDI EASLSDSQVR ERLASIVDTR RDAIIKLKLY  180
LAEEWANLGP SFLQVVASMH LNKAPIANHS EAQQHQEREI QKCSSAAAEE VHPSITIEVP  240
KVGECSSVEL QTLVKDSLLN SSEVNEEVHV QKQSTHADVP CPNSVNDNDA DLMEEQQTSV  300
PQNHNHGPSL MEKNSTARTY EWDDSIDGLQ GGTSNRASTI HLPSPKGRKL SPLKKYVSAK  360
ITKRRKAKKW SQLEEETLKT AVNKFGKGNW KLILNSHRDI FEERTEVDLK DKWRNLTRRK  420
CNYKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	8e-26	MYB_related family protein