PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX99608.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | NAC | ||||||||
Protein Properties | Length: 352aa MW: 39574.3 Da PI: 7.9201 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 178.2 | 2.2e-55 | 15 | 143 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+++yL kkv +++++ ++i+evd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ + + RDX99608.1 15 LPPGFRFHPTDEELITYYLLKKVMDSTFTG-RAIAEVDLNKSEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSkTCS 112 79*************************999.89***************99999****************************************974556 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129 lvg+kktLvfy+grapkgek++Wvmheyrle RDX99608.1 113 LVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 143 7****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence |
MDTSYHHLDH TEAHLPPGFR FHPTDEELIT YYLLKKVMDS TFTGRAIAEV DLNKSEPWEL 60 PEKAKMGEKE WYFFSLRDRK YPTGLRTNRA TEAGYWKATG KDREIYSSKT CSLVGMKKTL 120 VFYRGRAPKG EKSNWVMHEY RLEGKFAYHY LSRNSKDEWV ISRVFQKSNT SNGGSTMSAT 180 SGSKKTRMNT TTTTTSLCAE PSSPSSVYLP PLLDSSPYTA TASFNDRHNC SYDSTIKREH 240 VSCFSTIAAA TAAAVSTTNN SNNFANATTS FDLPPSQPLA TDPFARFQRN VGVSAFPSLR 300 SLQDNLQLPF FFSPAAQPFS SDFLGWPMPE EQKLVEGGSN MALESSELDC MW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53950.1 | 1e-109 | NAC family protein |