PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX99376.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | NAC | ||||||||
Protein Properties | Length: 300aa MW: 34457 Da PI: 9.3711 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 162 | 2.2e-50 | 21 | 148 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 pGfrFhPtdeelv +yL++kve+k+l++ e ik++diyk++PwdLpk+ + +ekewyfF+ r +ky+++ r+nr+t sg+Wkatg dk++++ +e RDX99376.1 21 LPGFRFHPTDEELVGFYLRRKVEKKPLRI-ELIKQIDIYKYDPWDLPKASSVGEKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYCVkePNE 118 69***************************.89***************8888899**************************************9755556 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkk+Lv+y+g+a kg+ktdW+mhe+rl RDX99376.1 119 CIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 148 6***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MDVTKLQNID DDDKKEDEVV LPGFRFHPTD EELVGFYLRR KVEKKPLRIE LIKQIDIYKY 60 DPWDLPKASS VGEKEWYFFC IRGRKYRNSI RPNRVTGSGF WKATGIDKPI YCVKEPNECI 120 GLKKSLVYYR GSAGKGTKTD WMMHEFRLPL PPNQKISNKP QPNDANHLHQ AEVWTLCRIF 180 KRVPSYKKYT PNLKDSAAEG ATTKSNSSSS KTCSLESDNG KPYLTFTNSS LIQQNERKPV 240 IGHVDQLNHL FLGQLGNVAQ TPTSSFWNHQ NVQFPNDNWD DLASVVQFAI DPSRGTILNN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43000.1 | 3e-87 | NAC family protein |