PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX99334.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 230aa MW: 25942.7 Da PI: 8.1531 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.9 | 8.6e-19 | 84 | 138 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq +Le+ F+ + +++ ++++ LA++l+L+ rqV vWFqNrRa+ k RDX99334.1 84 RKKLKLTKEQSATLEDIFKLHTTLNPAQKQALAEQLNLKHRQVEVWFQNRRARTK 138 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 115.3 | 3.6e-37 | 84 | 173 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk++l+keq+++LE+ F+ +++L+p +K++la++L+l+ rqv+vWFqnrRARtk+kq+E+d+++Lk+++++l++en rL+ke +eLr++ RDX99334.1 84 RKKLKLTKEQSATLEDIFKLHTTLNPAQKQALAEQLNLKHRQVEVWFQNRRARTKLKQTEVDCDFLKKCCEKLTDENLRLKKELQELRAQ 173 69*************************************************************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MEDDEACITN LSLGLGMGGH VPKKNNKQKV PCLDLTFQLC PKGEQEEEEE AIDVDQQHDM 60 SKGLCLKHPN EESPDSNNSN NASRKKLKLT KEQSATLEDI FKLHTTLNPA QKQALAEQLN 120 LKHRQVEVWF QNRRARTKLK QTEVDCDFLK KCCEKLTDEN LRLKKELQEL RAQKIGPTPL 180 YIQLPKATTL TICSSCEKLL KPNEGKKAAI SDVVRNSSHK LKSSIGLEGI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 133 | 141 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 1e-54 | HD-ZIP family protein |