PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX99286.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 322aa MW: 36271.7 Da PI: 5.3531 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.2 | 3.6e-17 | 113 | 161 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 s ykGV ++k +g++vAeIrdp r r +lg+f+t+eeAa a+++ ++++e RDX99286.1 113 SNYKGVQRRK-WGKYVAEIRDP-----RgVRLWLGTFDTEEEAAMAYERKKNEFE 161 57****8887.**********9.....56**********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MSGFSRQTQK QGMKCKRGKE KVPAKEENMN TVRKVRIVFN DPDATDYSSE DEKFLSNGHQ 60 LKGCSKRVVN EILLPCMPSK LHAEDSSQED VNSEKIKASP GPFASRRNRK LSSNYKGVQR 120 RKWGKYVAEI RDPRGVRLWL GTFDTEEEAA MAYERKKNEF ESSMLALSKK DALACENAKE 180 VLFHPSPSSV LDVSTTKAPQ DVNDIDSSVK EKVNEKTDGA GGSIDMEPVY SEDHSIQHLL 240 EEPVVPSLDG LYLDEVEKGA MLLGNDFYNF LDNDMKGDSM WNVEHREGTV LPLVDSAFDD 300 LTAAQKLDIK HMSKKQPYIE ND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.1 | 9e-24 | ERF family protein |