PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RDX98965.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 200aa MW: 22667.9 Da PI: 8.4673 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 59.8 | 4.8e-19 | 61 | 152 | 4 | 99 |
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 vl ps+ + ++++lp fae++ +g++ ++l+ ++gr+W+v++ yr+++ l++GW eF +n+L egD++vF+l + +e l v+vfr RDX98965.1 61 VLRPSYLYRGCIMYLPSCFAEKNlNGVSG---FIKLQLSNGRQWSVRCLYRGGR--AKLSQGWFEFTLENNLGEGDVCVFELLRVKEVVLQVTVFRV 152 7889*******************876743...59999999********665555..66************************999999999999985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 200 aa Download sequence |
MYGTIAGGEE PSGENEDEAE LRYRFYESAS ARKRTVTAEE RERAINAAKA FEPTNPFCRV 60 VLRPSYLYRG CIMYLPSCFA EKNLNGVSGF IKLQLSNGRQ WSVRCLYRGG RAKLSQGWFE 120 FTLENNLGEG DVCVFELLRV KEVVLQVTVF RVTEDTGLLS PPPNPMQQPS QNMSHTKLLN 180 PHLQHRVSTT KLEKVFLTGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G49480.1 | 3e-78 | B3 family protein |