PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX97826.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | CAMTA | ||||||||
Protein Properties | Length: 1017aa MW: 114955 Da PI: 7.9584 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 177.1 | 2.3e-55 | 46 | 161 | 3 | 117 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 +e ++rwl++ ei++iL nf+k++lt +++ rp+ gsl+L++rk +ryfrkDG+ w+kkkdgktvrE+hekLK g+v++l+cyYah+e+n++fqrr+yw RDX97826.1 46 QEaEHRWLRPAEICEILRNFTKFKLTPDPPIRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVREAHEKLKAGSVDALHCYYAHGEDNENFQRRSYW 144 5559*********************************************************************************************** PP CG-1 101 lLeeelekivlvhylev 117 +L+e+le+ivlvhy+e RDX97826.1 145 MLDEQLEHIVLVHYREI 161 **************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1017 aa Download sequence |
MAETRKYIRN PQLGLLPHFR AGKLHLDWIT DHNCWLGLEK LEEILQEAEH RWLRPAEICE 60 ILRNFTKFKL TPDPPIRPPA GSLFLFDRKA LRYFRKDGHR WRKKKDGKTV REAHEKLKAG 120 SVDALHCYYA HGEDNENFQR RSYWMLDEQL EHIVLVHYRE IKEGCKSGIS HLPLVPVTLV 180 GSSQNSSVPS STKINSPISV VQTSFTSSAN KVDQNGRASE YEDVNSQNGP RASSHAQPIS 240 NSILHSAPQL THENTGFSEF LRNPSISSWS SSFPGYSPGT GLSPWTLIQN SSRNTINMRD 300 GKHHVEGSEA DFTVHKLSNA GLDAVRRMQD GVVLRDRLIT DMCIQPAEED LSTVNQVQNE 360 HDLDSFRAQF HDHNDHPIVA TPKILVEQNL QNGGLDNHKS EQIESGEMKK LDSFGRWMDK 420 EIGGDCDNSL MASDSGNYWS TLDDHNEDKE VSSLRHMQLD MDSLGPSLSQ EQLFSIHDFS 480 PDWAYTGVRT KVLIVGTFLG SKKLSSETKW GCMFGEIEVS AEVLADNVIR CQTPLHSPGR 540 VPFYVTCSNR LACSEVREFE FAENPTKFLG PVGIKISPED EVRLQMRLLK LLDLGPDNKW 600 LKCSVSECDK CKLKGTMYSM RDDSGVFEDT FQIDGIGLIN HRDVLFQRLM RDKLYEWLIY 660 KVHEGGKGPH VLDDEGQGVI HLTAALGYMW AMAPLVAAGI SPNFRDTHGR TGLHWASYFG 720 REETVIVLVK LGATPGAVED PTSAFPRGQT AADIASSRGH KGIAGFLAEA DLIYQLSVLT 780 VKENDTDNNA TTMAADSAFQ SAEDDSSNMT MDEQHYLKES LTVFRKSAHA AASILAAFRA 840 RSFRQRQLAK NSSDISEAVF DAVADSLGKL QKMGHFEDYL HFAALRIQKR YRGWKGRKDF 900 LKIRDRIVKI QAHVRGHQVR KQYKKVVWSV SIVEKVILRW RRKGTGLRGF RLGQPVGIVA 960 KDADKSDEYE FLSIGRKQKS DGVKKALDRV KSMVHNPEAR DQYMRLIMKY QKFKVWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G09410.2 | 0.0 | CAMTA family protein |