PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX97598.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MYB
Protein Properties Length: 316aa    MW: 35088 Da    PI: 7.6186
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX97598.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.42.8e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++++G+g+W++++   g+ R+ k+c++rw +yl
       RDX97598.1 14 KGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLMRCSKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding47.63.9e-1567112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+ E++ + ++ ++lG++ W++Ia++++  Rt++++k++w+++l
       RDX97598.1  67 RGNFTEHEEKMIFHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLMRCS KSCRLRWTNY  60
LRPGIKRGNF TEHEEKMIFH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLKQND  120
QSGSDEGVDQ EGHSSSCSHP KGQWERRLQT DIKMAKQALC DALSLHNPAI VPVTTPSSSS  180
HHHPPYNHAS SSSSSSYASS YENISRLMEN WMKSPNSNSA NSSPGYYSFG NMANKINRAG  240
SSSSEGAYST TTPTACAQDH AFDSLLTLNS SKHHGSPSQT QVPLSLLENW LFDDGAAQCH  300
EDLMNMSLEE STAGLF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112118LKKKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.11e-106MYB family protein