PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX97472.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 245aa MW: 27866.7 Da PI: 6.7854 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.3 | 2.3e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien rqvtfskRrng+lKKA+ELSvLCdaevaviifsstgk+ye+s+ RDX97472.1 9 KKIENLNSRQVTFSKRRNGLLKKAKELSVLCDAEVAVIIFSSTGKVYEFSN 59 68***********************************************95 PP | |||||||
2 | K-box | 59.8 | 1.1e-20 | 93 | 173 | 20 | 100 |
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + + Lk+ei +L+ +++G++L+ LslkeLq+Le+qL +++ +++kK++ l+eq+++++ +e+++ en+ Lrk+lee RDX97472.1 93 DTTFLKDEITKLRLAYLRMMGKELDGLSLKELQHLENQLSEGILAVKDKKEQELVEQLRRSRIQEQKVMLENEVLRKQLEE 173 56679*************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MGRGKIEIKK IENLNSRQVT FSKRRNGLLK KAKELSVLCD AEVAVIIFSS TGKVYEFSNT 60 SMEHTLSRYS KGTESDCAEQ PVDVPPTNVM EPDTTFLKDE ITKLRLAYLR MMGKELDGLS 120 LKELQHLENQ LSEGILAVKD KKEQELVEQL RRSRIQEQKV MLENEVLRKQ LEEIQNKTKT 180 QFLEFSSLDR TFSKNGSKPH FDCASEENDL SDTSLQLGLS TDYGRQRKAL KIEPCNDSGS 240 QVASQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57390.1 | 1e-69 | MIKC_MADS family protein |