PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX96681.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 202aa MW: 22409 Da PI: 11.1831 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.7 | 9.7e-17 | 42 | 87 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W +eEd +l ++v+ +G+++W++I+r + gR++k+c++rw + RDX96681.1 42 KGPWNAEEDGILTRLVETHGPRNWALISRSIK-GRSGKSCRLRWCNQ 87 79*****************************9.***********985 PP | |||||||
2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 96 | 136 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++t Ede +++a++++G++ W+tIar ++ gRt++ +k++w+ RDX96681.1 96 PFSTREDEVILHAHTRFGNK-WATIARLLP-GRTDNAVKNHWN 136 79******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MKRSSSSSSS SYSSASVSAS ESTPGGGNDN NNKKNKNCNR IKGPWNAEED GILTRLVETH 60 GPRNWALISR SIKGRSGKSC RLRWCNQLSP AVEHRPFSTR EDEVILHAHT RFGNKWATIA 120 RLLPGRTDNA VKNHWNATLK RRATQRRPFH ADLDDDPFTR LTLAPPGSGS SVAVHHDRRQ 180 VSPPGFLDAM RDVISREGFS AL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 4e-54 | MYB family protein |