PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX96333.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | C2H2 | ||||||||
Protein Properties | Length: 236aa MW: 26616.4 Da PI: 9.954 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19.9 | 2e-06 | 84 | 103 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r nL+ H+ RDX96333.1 84 FSCPVCLKTFNRYNNLQMHM 103 89*****************9 PP | |||||||
2 | zf-C2H2 | 12 | 0.00066 | 168 | 190 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk+ k + ++H +++ RDX96333.1 168 FTCRKCGKPLAVKGDWRTHEKNC 190 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MNQNQLQPLP LLSSFLGSAP KEATLLQNQN PKACEDVTVA LHIGLPDNSS GSTNNHGFVN 60 TTTHVPNNYW IPTQEQILIG FSHFSCPVCL KTFNRYNNLQ MHMWGHGSQY RRGPESLKRS 120 HPRPLLDIPC YCCCGGCKNN IEHPRAKALK DFRTLQTHYK RKHGAKPFTC RKCGKPLAVK 180 GDWRTHEKNC GKRWLCLCGS DFKHKRSLKD HIKAFGFGHT PFSSSSSSSQ PNPSNF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 115 | 120 | ESLKRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34790.1 | 8e-96 | C2H2 family protein |