PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX95998.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 410aa MW: 44716.4 Da PI: 5.6531

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX95998.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.5e-17	48	93	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd l ++v+q+G ++W+ Iar ++ gR++k+c++rw + RDX95998.1 48 KGPWSPEEDAVLSRLVAQFGARNWSMIARGVP-GRSGKSCRLRWCNQ 93 79****************************.*********985 PP
2	Myb_DNA-binding	49	1.4e-15	119	158	6	47
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +eEd ++v a++ +G++ W++Ia+ ++ gRt++ +k++w++ RDX95998.1 119 EEEDSIIVSAHAIHGNK-WAAIAKLLP-GRTDNAIKNHWNST 158 7**************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MTEEDRSAEP TVRNGVAVTK LGGEELELEG GDGEVMVVGD GSVAGRVKGP WSPEEDAVLS 60 RLVAQFGARN WSMIARGVPG RSGKSCRLRW CNQLDPYVKR KPFTGNIGSP LIPMFLELEE 120 EDSIIVSAHA IHGNKWAAIA KLLPGRTDNA IKNHWNSTLK RRCMDLGRYV LANADVIEDG 180 SFEKTKASSE ETMCIGDINS LNRSEARNLM MDNENKPPRK DDGKVEEHPT LYRPVARISA 240 FSVYNPPGRS TTGSCSKMFP RQSPLIQSPK PDIGSCKLFD GIDCESMIPL QCGHGCCTVE 300 LREDHSHDSL LGPEFVDNLE SPFSSHALIS IATDLNNIAW IKSGLENYTA GVTENAANLT 360 ASQGVATASQ TNFLQQDLKN GYGHFEEGPG KFLGAMQEAS RQHFALPAKV

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MTEEDRSAEP TVRNGVAVTK LGGEELELEG GDGEVMVVGD GSVAGRVKGP WSPEEDAVLS  60
RLVAQFGARN WSMIARGVPG RSGKSCRLRW CNQLDPYVKR KPFTGNIGSP LIPMFLELEE  120
EDSIIVSAHA IHGNKWAAIA KLLPGRTDNA IKNHWNSTLK RRCMDLGRYV LANADVIEDG  180
SFEKTKASSE ETMCIGDINS LNRSEARNLM MDNENKPPRK DDGKVEEHPT LYRPVARISA  240
FSVYNPPGRS TTGSCSKMFP RQSPLIQSPK PDIGSCKLFD GIDCESMIPL QCGHGCCTVE  300
LREDHSHDSL LGPEFVDNLE SPFSSHALIS IATDLNNIAW IKSGLENYTA GVTENAANLT  360
ASQGVATASQ TNFLQQDLKN GYGHFEEGPG KFLGAMQEAS RQHFALPAKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	3e-93	MYB family protein