PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX95846.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 202aa MW: 22570.4 Da PI: 6.2382 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.6 | 1.5e-18 | 15 | 64 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr +k +g+Wv+eIr+p g ++r++lg+f t+e+Aa+a++ a++ ++g RDX95846.1 15 AYRGVRKRK-WGKWVSEIREP---GTKTRIWLGSFETPEMAAAAYDVAALHFRG 64 69****999.**********8...325***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MDMPSTTHVG AASSAYRGVR KRKWGKWVSE IREPGTKTRI WLGSFETPEM AAAAYDVAAL 60 HFRGRDARLN FPELASTLPR PVSNNSDHIR MAAHEAALRL RTNNVAPDTG GSAASGSAAP 120 LTVRLSPTQI QAINDSPMDS PQTWMQMPDA FMLDHHSMLF ANGYAFEDDD WDNMQRTKEL 180 MYWKSTCQSD EEVQVCFLFV SL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71450.1 | 9e-59 | ERF family protein |