PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX95845.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 184aa MW: 20384.8 Da PI: 6.9198 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.6 | 1.1e-16 | 21 | 70 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + kGVr++k +g+Wv+eIr+p g + r +lg++ tae Aa a++ a +l+ RDX95845.1 21 KLKGVRRRK-WGKWVSEIRVP---G-TqERLWLGTYATAEAAAVAHDVAVYCLRR 70 78****998.**********8...3.35**********************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MSWSSNSSSA LHGTSRGRDK KLKGVRRRKW GKWVSEIRVP GTQERLWLGT YATAEAAAVA 60 HDVAVYCLRR PSSFDKLNFP DTLSSYALEL RDMSPRSVQK VASDVGMDVD ARNIIASKTS 120 TPQPVTYDTQ KNIDGHDRLC VSTVHSDLLC WDGLGNDDCS TWQASAADST QMDQPLSISI 180 EDYL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 23 | 29 | KGVRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71520.1 | 4e-30 | ERF family protein |