PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX95727.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

TCP

Protein Properties

Length: 435aa MW: 49782 Da PI: 8.1713

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX95727.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	132.4	4.3e-41	116	271	2	133
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................ssssasec.....eaes 77 +gkkdrhski T++g+RdRR+Rls+e+a+rfF Lqd+LGfdk+skt+eWLl+qak +i l++ s+ss+sec + ++ RDX95727.1 116 PGKKDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVEWLLNQAKVEINRLAKEkkrkkknsdhncssagakSASSSSECeegvsSLDE 214 79************************************************************99998888887777777666666677666554444 PP TCP 78 ssssasnsssgkaaksaa.kskksqksaasalnlakesrakarararertrekmrik 133 ++s+++++++++ k+ + k ++ +++++ ake r++ar+rarertrekmr + RDX95727.1 215 VVVSGDQEQEEEKVKKVVkRRVKHCRKISAFHSRAKEFRERARERARERTREKMRSR 271 455555555556666666466666677777899999****************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MQSQTSDTFP SHNGNDPISY YDPAFHYRPF SIDSESNPTS KQENNRDLPS PPPLSFFHFP 60 SPPFEDPQIF LEQHHDFLLQ FLPQPLPQGP DPQPIDDAIG MEASIKTSDQ IPRKRPGKKD 120 RHSKINTARG LRDRRMRLSL EVAKRFFGLQ DMLGFDKASK TVEWLLNQAK VEINRLAKEK 180 KRKKKNSDHN CSSAGAKSAS SSSECEEGVS SLDEVVVSGD QEQEEEKVKK VVKRRVKHCR 240 KISAFHSRAK EFRERARERA RERTREKMRS RGLADESKQC REEKNQDLTQ LDSWNPFQTG 300 EEYGTKSHTV HPSLDVITQA KEQSYHAKEH LGTAEAMALS DDSLVVFSKW SPSLFFNNSG 360 FSQENFSPWE NHGRPKTITS HIFDVPTEMR KPAIQASLDI IRLLDLIKVI VTQLCCLQNL 420 ELLYHLSFDT MMAAS

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MQSQTSDTFP SHNGNDPISY YDPAFHYRPF SIDSESNPTS KQENNRDLPS PPPLSFFHFP  60
SPPFEDPQIF LEQHHDFLLQ FLPQPLPQGP DPQPIDDAIG MEASIKTSDQ IPRKRPGKKD  120
RHSKINTARG LRDRRMRLSL EVAKRFFGLQ DMLGFDKASK TVEWLLNQAK VEINRLAKEK  180
KRKKKNSDHN CSSAGAKSAS SSSECEEGVS SLDEVVVSGD QEQEEEKVKK VVKRRVKHCR  240
KISAFHSRAK EFRERARERA RERTREKMRS RGLADESKQC REEKNQDLTQ LDSWNPFQTG  300
EEYGTKSHTV HPSLDVITQA KEQSYHAKEH LGTAEAMALS DDSLVVFSKW SPSLFFNNSG  360
FSQENFSPWE NHGRPKTITS HIFDVPTEMR KPAIQASLDI IRLLDLIKVI VTQLCCLQNL  420
ELLYHLSFDT MMAAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	180	184	KKRKK
2	253	263	RERARERARER
3	255	267	RARERARERTREK
4	255	265	RERARERARER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18550.1	3e-26	TCP family protein