PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX95580.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | C2H2 | ||||||||
Protein Properties | Length: 212aa MW: 24339.6 Da PI: 5.1679 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.4 | 0.00024 | 29 | 51 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C C++ F++ L H++ H RDX95580.1 29 YECVFCKRGFTTAQALGGHMNIH 51 99*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MEEDSKSSSE EIDRSSEHNN DEMGTGRSYE CVFCKRGFTT AQALGGHMNI HRKDRANKAK 60 PNFPPSSSTK VDESTHYADL GFYNPSYAVR GNCYSTLHPD REVDTNYNYY HQLYFPSHPC 120 GAKSPSHVHY SEVLCVENQR DPQLLFGQDW RQRGLSLYTN PLCVHENKDK IESNSEEDDL 180 DLELRLEMSC KLEAERSKIQ GRLQAFEEGT QD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43540.1 | 3e-16 | C2H2 family protein |