PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX95469.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MIKC_MADS

Protein Properties

Length: 373aa MW: 42851 Da PI: 9.8621

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX95469.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	96.4	1.2e-30	35	84	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fs++g+lyey+ RDX95469.1 35 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSTRGRLYEYA 84 79***********************************************8 PP
2	K-box	91.3	1.7e-30	103	204	4	98
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkk.......ekelqeenkaLr 95 s+ +s++ea+++ +qqe++kLk++i+ +q+ +Rh+lGe L+sLslkeL++Le++Lek+l+++Rs+K+e l++ +e +qk+ e elq++n+ Lr RDX95469.1 103 SNAESVSEANTQFYQQESSKLKRQIRDIQNLNRHILGEALSSLSLKELKNLESRLEKGLSRVRSRKHETLFADVEFMQKRvliisldEIELQNHNNFLR 201 444559*************************************************************************96666666789999999999 PP K-box 96 kkl 98 +k+ RDX95469.1 202 TKV 204 987 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
VARLQVVAEM EFPNEATSEG FSHQKKTGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE 60 LSVLCDAEVA LVVFSTRGRL YEYANNSVRG TIDRYKKACA ASSNAESVSE ANTQFYQQES 120 SKLKRQIRDI QNLNRHILGE ALSSLSLKEL KNLESRLEKG LSRVRSRKHE TLFADVEFMQ 180 KRVLIISLDE IELQNHNNFL RTKVSSFIPS KNIAEDERAQ QHVCESIPSQ SYDRNFFPVN 240 LIDSNHQYSR QDQTPLQLNF HVRHIQEFVV SRYVASGVNK RNQEPEFLAI HHMILFMYPI 300 EIHSDFHSIG INLKIILFKT QFSIKAPNVC FQNPHLSAVT KLGNICHQTP FLIQVGVTGK 360 SYQSIVKVPF PTL

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

VARLQVVAEM EFPNEATSEG FSHQKKTGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE  60
LSVLCDAEVA LVVFSTRGRL YEYANNSVRG TIDRYKKACA ASSNAESVSE ANTQFYQQES  120
SKLKRQIRDI QNLNRHILGE ALSSLSLKEL KNLESRLEKG LSRVRSRKHE TLFADVEFMQ  180
KRVLIISLDE IELQNHNNFL RTKVSSFIPS KNIAEDERAQ QHVCESIPSQ SYDRNFFPVN  240
LIDSNHQYSR QDQTPLQLNF HVRHIQEFVV SRYVASGVNK RNQEPEFLAI HHMILFMYPI  300
EIHSDFHSIG INLKIILFKT QFSIKAPNVC FQNPHLSAVT KLGNICHQTP FLIQVGVTGK  360
SYQSIVKVPF PTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42830.2	3e-89	MIKC_MADS family protein