PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX95379.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 511aa MW: 53073.5 Da PI: 8.2494

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX95379.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.8e-05	55	77	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H RDX95379.1 55 FVCEICKKGFQRDQNLQLHRRGH 77 89*******************88 PP
2	zf-C2H2	11.3	0.0011	131	153	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +++ RDX95379.1 131 WKCDKCSKKYAVQSDWKAHSKVC 153 58*****************9877 PP
3	zf-C2H2	11.7	0.00081	161	179	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr++++ +H + RDX95379.1 161 DCGTVFSRRDSFITHRAFC 179 9**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MPVDLDNAST ASGDASVSSS GNPTTKKKRN LPGMPDPEAE VIALSPKTLL ATNRFVCEIC 60 KKGFQRDQNL QLHRRGHNLP WKLRQRSSKE VKKRVYVCPE ATCVHHDPSR ALGDLTGIKK 120 HFCRKHGEKK WKCDKCSKKY AVQSDWKAHS KVCGTREYKC DCGTVFSRRD SFITHRAFCD 180 ALAEESSRSH TVVKANSDND SKVLTAESPP PPQSNLVHYN NVVAALLFFI LVSGVSELPE 240 NNPPQVIEEP PQAAAAAALS GSCGSNSSST CSTSNGAAAA ATTSSNSVFA SLFASSTASG 300 TLQSQTPAFS DLIRAMGPPD HPADISCPSS SEAISLCLST TNASPIFATG GQERRQYTPS 360 PQPAMSATAL LQKAAQMGAA ATNASLLRGF GIVSSSSASA SSSQQDGLQW GQQQLESESG 420 SVPAGLGLGL PCDGGSGLKE LMMGTPSMFG PKQHTTLDFL GLGMAAGGTA GGGLSALITS 480 IGGGLDVTAA AAAAAAFGNG DFSGKDIGRS S

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MPVDLDNAST ASGDASVSSS GNPTTKKKRN LPGMPDPEAE VIALSPKTLL ATNRFVCEIC  60
KKGFQRDQNL QLHRRGHNLP WKLRQRSSKE VKKRVYVCPE ATCVHHDPSR ALGDLTGIKK  120
HFCRKHGEKK WKCDKCSKKY AVQSDWKAHS KVCGTREYKC DCGTVFSRRD SFITHRAFCD  180
ALAEESSRSH TVVKANSDND SKVLTAESPP PPQSNLVHYN NVVAALLFFI LVSGVSELPE  240
NNPPQVIEEP PQAAAAAALS GSCGSNSSST CSTSNGAAAA ATTSSNSVFA SLFASSTASG  300
TLQSQTPAFS DLIRAMGPPD HPADISCPSS SEAISLCLST TNASPIFATG GQERRQYTPS  360
PQPAMSATAL LQKAAQMGAA ATNASLLRGF GIVSSSSASA SSSQQDGLQW GQQQLESESG  420
SVPAGLGLGL PCDGGSGLKE LMMGTPSMFG PKQHTTLDFL GLGMAAGGTA GGGLSALITS  480
IGGGLDVTAA AAAAAAFGNG DFSGKDIGRS S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-142	C2H2 family protein