PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX95340.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 271aa MW: 30532.8 Da PI: 6.5648

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX95340.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00022	101	123	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H RDX95340.1 101 FSCNYCQRKFYSSQALGGHQNAH 123 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MDLQRQDPCP SENLNTITFS DTLPCPKPSM DTQTKKNHTE KEDQTHPHDS VPRFLLDLSL 60 SSKDSVDDSK PELNLLNCFH TNFSENSSES SQGNELDPRV FSCNYCQRKF YSSQALGGHQ 120 NAHKRERTLA RRGYKTGAAD FGHTYSSMPF LPSHGLYNKA LGIQVHSMIN KPSHQTPFFG 180 LCHSKGWQRQ PLDSQPAIGN FRVGAETESS LADSVPKLGK FSTRLVTEGF GDWSTKMHSF 240 NGCDCLTDSY FDPPVVGEID HLYWDQRSYE S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10970.1	3e-35	C2H2 family protein