PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX95209.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 550aa MW: 60201.6 Da PI: 7.3065

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX95209.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.4	2.8e-11	357	413	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf.....gtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g RDX95209.1 357 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFvhmvtATEEEAAEAYDIAAIKFRG 413 57**************988633...59999999966666688************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MARANNWLSF SLSPMEMLRT SEPQFVQYDA ASATSSHHYF LDNLYTNGWG NGNPKSHVMF 60 EQNLNRSDVS FVESSQTVSH APPPKLEDFL GDSSAVMRYS DSQTETQDSS LTHMYDHHGS 120 AYFGDQQDLK AIAGFQAFST NSGSEVDDSA SIGKAQPTEF GTHSIESSGN EFAAFSGAGS 180 AATGTLSLAV AQSSEKAVVA ADSGSSKKIV DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS 240 CRREGQARKG RQGKAAFDHI THHSPILKFV LAYIEVVERP LLPPESKLSW LSGGYDKEEK 300 AARAYDLAAL KYWGPTATTN FPVSNYTKEV EEMKHVTKQE FIASLRRKSS GFSRGASIYR 360 GVTRHHQQGR WQARIGRVAG NKDLYLGTFV HMVTATEEEA AEAYDIAAIK FRGANAVTNF 420 EMNRYDVEAI MKSSLPVGGA AKRLKLSLES EQKGPVSSSS SQQNPQCANV SGNINFSAIH 480 HQPIASIPCG IPFDSTAAYY HHNLFQHFHP TNNAGTTASA VNVTSANATG LTALPPPAPA 540 DFFIWPHQSY

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MARANNWLSF SLSPMEMLRT SEPQFVQYDA ASATSSHHYF LDNLYTNGWG NGNPKSHVMF  60
EQNLNRSDVS FVESSQTVSH APPPKLEDFL GDSSAVMRYS DSQTETQDSS LTHMYDHHGS  120
AYFGDQQDLK AIAGFQAFST NSGSEVDDSA SIGKAQPTEF GTHSIESSGN EFAAFSGAGS  180
AATGTLSLAV AQSSEKAVVA ADSGSSKKIV DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS  240
CRREGQARKG RQGKAAFDHI THHSPILKFV LAYIEVVERP LLPPESKLSW LSGGYDKEEK  300
AARAYDLAAL KYWGPTATTN FPVSNYTKEV EEMKHVTKQE FIASLRRKSS GFSRGASIYR  360
GVTRHHQQGR WQARIGRVAG NKDLYLGTFV HMVTATEEEA AEAYDIAAIK FRGANAVTNF  420
EMNRYDVEAI MKSSLPVGGA AKRLKLSLES EQKGPVSSSS SQQNPQCANV SGNINFSAIH  480
HQPIASIPCG IPFDSTAAYY HHNLFQHFHP TNNAGTTASA VNVTSANATG LTALPPPAPA  540
DFFIWPHQSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.3	1e-172	AP2 family protein