PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX95167.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 547aa MW: 60065.3 Da PI: 4.6756

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX95167.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.2	3.7e-18	37	84	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed++lvd+vk++G g+W+++ ++ g+ R++k+c++rw ++l RDX95167.1 37 KGPWTSTEDDILVDYVKKHGEGNWNAVQKHTGLLRCGKSCRLRWANHL 84 79****************************99********9986 PP
2	Myb_DNA-binding	48.3	2.3e-15	90	133	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE++l++++++ +G++ W++ a+ ++ gRt++++k++w++ RDX95167.1 90 KGAFTAEEEQLIAELHATMGNK-WARMAANLP-GRTDNEIKNYWNT 133 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MKRPSNEFED EVLPNDQSGA RLSDEGYEGS AGVVLKKGPW TSTEDDILVD YVKKHGEGNW 60 NAVQKHTGLL RCGKSCRLRW ANHLRPNLKK GAFTAEEEQL IAELHATMGN KWARMAANLP 120 GRTDNEIKNY WNTRIKRRQR AGLPLYPPEV CLKALQESQR GQSSGGLNGA NKTHPDFLQK 180 NSYEIHDTIF DSVKDNQGIL PYVPELSDIS VYGNMLKGLD SSQYCSFVPP TSPKPKRLKE 240 STMPFIDSSD MNRNDLYPFD QFQDNNSDKI AQSFGMQIPL DPGCSSHSSI CYSHSLSNGN 300 SSTSKPYEAV KSELPSLQYP ELDLSSWGTS PPPPLLESID DFIQSPTPIS TLESDCSSPP 360 NSGLLDALLY QAKTLNSSKN HYSDKSSNSS IVNPGDRADS SALNLYETDW EDYSDPVSPF 420 GATSILNECS ALSANANSLD EQLSVPTFNG NILNLESDDK VCTPNSENLT LSMLNVTRPD 480 FLLASDWHDV GSAHGKNQAF TTDATTTLLG DDLATDHQHV TAGTSKSSQV WGFGSCTTAM 540 IDLENLN

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MKRPSNEFED EVLPNDQSGA RLSDEGYEGS AGVVLKKGPW TSTEDDILVD YVKKHGEGNW  60
NAVQKHTGLL RCGKSCRLRW ANHLRPNLKK GAFTAEEEQL IAELHATMGN KWARMAANLP  120
GRTDNEIKNY WNTRIKRRQR AGLPLYPPEV CLKALQESQR GQSSGGLNGA NKTHPDFLQK  180
NSYEIHDTIF DSVKDNQGIL PYVPELSDIS VYGNMLKGLD SSQYCSFVPP TSPKPKRLKE  240
STMPFIDSSD MNRNDLYPFD QFQDNNSDKI AQSFGMQIPL DPGCSSHSSI CYSHSLSNGN  300
SSTSKPYEAV KSELPSLQYP ELDLSSWGTS PPPPLLESID DFIQSPTPIS TLESDCSSPP  360
NSGLLDALLY QAKTLNSSKN HYSDKSSNSS IVNPGDRADS SALNLYETDW EDYSDPVSPF  420
GATSILNECS ALSANANSLD EQLSVPTFNG NILNLESDDK VCTPNSENLT LSMLNVTRPD  480
FLLASDWHDV GSAHGKNQAF TTDATTTLLG DDLATDHQHV TAGTSKSSQV WGFGSCTTAM  540
IDLENLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11440.1	1e-112	MYB family protein