PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX95032.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 114aa MW: 13529.6 Da PI: 10.8363 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.1 | 1.5e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+ +++++G+ +W+ +r g+ R++k+c++rw +yl RDX95032.1 14 KGTWTPEEDSKLIAYITRYGSWNWRQLPRFAGLARCGKSCRLRWMNYL 61 799*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 61.4 | 1.9e-19 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T++E+e +++ +k+lG++ W++Ia++++ gRt++++k++w++ RDX95032.1 67 RGNFTPQEEECIIRMHKKLGNR-WSAIAAELP-GRTDNEIKNHWHTT 111 89********************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence |
MVRTPSWDKS GVRKGTWTPE EDSKLIAYIT RYGSWNWRQL PRFAGLARCG KSCRLRWMNY 60 LRPDLKRGNF TPQEEECIIR MHKKLGNRWS AIAAELPGRT DNEIKNHWHT TLKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 5e-59 | MYB family protein |