PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX94624.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | C2H2 | ||||||||
Protein Properties | Length: 164aa MW: 18423.4 Da PI: 9.5909 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.9 | 0.00068 | 38 | 60 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+++Fs+ L H +H RDX94624.1 38 FKCKSCNRRFSSFQALGGHRASH 60 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 10.7 | 0.0016 | 84 | 106 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+Cg F L H+r+H RDX94624.1 84 HPCPICGLEFAIGQALGGHMRKH 106 78*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MKRGREEGVA NCLMLLTKVG ESETNPSKDR ELRNIGDFKC KSCNRRFSSF QALGGHRASH 60 KKPKLMVTDL SCHHVQLPSP TRMHPCPICG LEFAIGQALG GHMRKHRSAI NNGLENCRRD 120 SLSILKKSKD AAERLNLCFD LNLTPLENDD LKLNLRTPVL NCFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28710.1 | 3e-36 | C2H2 family protein |