PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX94372.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 260aa MW: 28890.3 Da PI: 5.7595 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.3 | 1.9e-18 | 39 | 88 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++ +g+WvAeIr+p + r +r +lg+f+t +Aa a++aa++kl+g RDX94372.1 39 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHDAALAYDAAARKLYG 88 69****999.**********8...3.35************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MLKSGMRIEE RKQVRKVAQA SSRKGCMRGK GGPENASCTY KGVRQRTWGK WVAEIREPNR 60 GARLWLGTFD TSHDAALAYD AAARKLYGSD AKLNLPELVV PVNVNVNANS QRPPNPSPNT 120 QIHQMQQQQP QPQIHQTFDV TTVPSSDLNN IMNPVVSMAS QQADDAPVFT NNNSIAPLPF 180 ETNPAAPMEN YFSKPVENNE DKFRSFWGTT NDTNPMFDES IWTEAAMSLD FPIIADDGIY 240 GTGNLGGWDS QQTPWCMSIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 4e-38 | ERF family protein |