PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX94139.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | GRF | ||||||||
Protein Properties | Length: 373aa MW: 41899.5 Da PI: 8.6538 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 78.2 | 8e-25 | 81 | 125 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ RDX94139.1 81 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVES 125 79****************************************986 PP | |||||||
2 | QLQ | 63.2 | 6.9e-22 | 19 | 55 | 1 | 37 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 saFT +Q+q+L++Q+l++Ky++a++PvPp+L+++iqk RDX94139.1 19 SAFTVSQWQELEHQALIFKYMVAGLPVPPDLVLPIQK 55 89*********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 373 aa Download sequence |
MNNSGGGTLM GLSNSYGRSA FTVSQWQELE HQALIFKYMV AGLPVPPDLV LPIQKSFDSL 60 SHGFFHHPSL SYCSFYGKKV DPEPGRCRRT DGKKWRCSKE AYPDSKYCER HMHRGRNRSR 120 KPVESQTMTH SSSTVTSLTV TGGSSGTVNF QNLPANTFGN LQGTDSGTDH TNYHLDSIPY 180 AIPSKEYRYL QGLKSEGGEH CFFSEASGSN KVLQMESQLE NTWPLMSTRV ASFSTSKSSN 240 DSLLHSDYPQ HSFLSGEYAS GEHVKEEGQP LRPFFNEWPK SRESWSGLED ERSNQTGLST 300 TQLSISIPMS SDFSATSSQS PHVRKGERPT MIEPQETKER LRRKKEKKES KKLQGLSLPK 360 EESPSNYKQL LQD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 342 | 347 | RRKKEK |
2 | 342 | 349 | RRKKEKKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 5e-47 | GRF family protein |