PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX94139.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

GRF

Protein Properties

Length: 373aa MW: 41899.5 Da PI: 8.6538

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX94139.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.2	8e-25	81	125	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ RDX94139.1 81 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVES 125 79****************************************986 PP
2	QLQ	63.2	6.9e-22	19	55	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 saFT +Q+q+L++Q+l++Ky++a++PvPp+L+++iqk RDX94139.1 19 SAFTVSQWQELEHQALIFKYMVAGLPVPPDLVLPIQK 55 89*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MNNSGGGTLM GLSNSYGRSA FTVSQWQELE HQALIFKYMV AGLPVPPDLV LPIQKSFDSL 60 SHGFFHHPSL SYCSFYGKKV DPEPGRCRRT DGKKWRCSKE AYPDSKYCER HMHRGRNRSR 120 KPVESQTMTH SSSTVTSLTV TGGSSGTVNF QNLPANTFGN LQGTDSGTDH TNYHLDSIPY 180 AIPSKEYRYL QGLKSEGGEH CFFSEASGSN KVLQMESQLE NTWPLMSTRV ASFSTSKSSN 240 DSLLHSDYPQ HSFLSGEYAS GEHVKEEGQP LRPFFNEWPK SRESWSGLED ERSNQTGLST 300 TQLSISIPMS SDFSATSSQS PHVRKGERPT MIEPQETKER LRRKKEKKES KKLQGLSLPK 360 EESPSNYKQL LQD

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MNNSGGGTLM GLSNSYGRSA FTVSQWQELE HQALIFKYMV AGLPVPPDLV LPIQKSFDSL  60
SHGFFHHPSL SYCSFYGKKV DPEPGRCRRT DGKKWRCSKE AYPDSKYCER HMHRGRNRSR  120
KPVESQTMTH SSSTVTSLTV TGGSSGTVNF QNLPANTFGN LQGTDSGTDH TNYHLDSIPY  180
AIPSKEYRYL QGLKSEGGEH CFFSEASGSN KVLQMESQLE NTWPLMSTRV ASFSTSKSSN  240
DSLLHSDYPQ HSFLSGEYAS GEHVKEEGQP LRPFFNEWPK SRESWSGLED ERSNQTGLST  300
TQLSISIPMS SDFSATSSQS PHVRKGERPT MIEPQETKER LRRKKEKKES KKLQGLSLPK  360
EESPSNYKQL LQD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	342	347	RRKKEK
2	342	349	RRKKEKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	5e-47	GRF family protein