PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX94005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | GRF | ||||||||
Protein Properties | Length: 322aa MW: 35953.2 Da PI: 8.5769 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 68.4 | 9.3e-22 | 65 | 109 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++ +++k+C+rH+ r r rsrk++e+ RDX94005.1 65 DPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVES 109 79****************************************986 PP | |||||||
2 | QLQ | 57.8 | 3.2e-20 | 12 | 47 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTaaQ+++L++Q+l++KyL a++ vPp+Ll++i+k RDX94005.1 12 PFTAAQWHELEHQALIFKYLKAGLSVPPDLLLPIRK 47 9*********************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MSVPPPPAMW TPFTAAQWHE LEHQALIFKY LKAGLSVPPD LLLPIRKSLQ LMSHPSLGCY 60 GKKIDPEPGR CRRTDGKKWR CSRDAHPDSK YCDRHMIRRR YRSRKPVESQ SHSHSSSSSS 120 SAASSNPVAP APSPAAAAAA ATTTATLHSH TLPLHTNGTR EAFTFTLPHL HMDPLTLPGD 180 NTKKTYRFGL NSEADEHNVL QKDLGSVRYQ GYDFTSDGMW SHMSQIPSNT VSESRSGSTM 240 LGNCFQQQTM RDAELLNLET ARTKDLIFSS QLSSAGSLKQ EYQSPQSLFS DWDWKKDLSS 300 STIEYRPNKD FNCNPDVNVD SN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 9e-39 | GRF family protein |