PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX93666.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

CO-like

Protein Properties

Length: 380aa MW: 42696.1 Da PI: 6.8527

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX93666.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.4	1.1e-06	8	52	2	40
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 + r C+ +++ + l+C+ ++ lC +C e H+ Ht++ RDX93666.1 8 NSRPCDYCGHSTALLYCRADSAKLCFSCDREVHSTnqlfskHTRT 52 6789****99*******************668888888876 PP
2	zf-B_box	25.8	2.3e-08	54	96	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +++ ++++ C ++ + +C++C e+H + H+++pl RDX93666.1 54 LCDACDDSPATILCSTDTSVFCQNCDWEKH-NpslsslHQRRPL 96 7*****************************.5499999998875 PP
3	CCT	61.2	3.3e-21	334	378	1	45
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 R+ allRYk+K+ktR+++K+irYesRK++AesR RvKGrF+k+++ RDX93666.1 334 RDSALLRYKQKKKTRRYDKHIRYESRKVRAESRVRVKGRFAKREQ 378 899***************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MNSEESQNSR PCDYCGHSTA LLYCRADSAK LCFSCDREVH STNQLFSKHT RTLLCDACDD 60 SPATILCSTD TSVFCQNCDW EKHNPSLSSL HQRRPLEGFS GCPSVSELFS ILGFPDVTKK 120 TLLSSPQGSA PYGFLGSEIE GLSDLFVWDS PSVVTLDDLI SSSASSHSFQ AMEVPPLPKN 180 RKAACGRHKE EILSQLRELA KSEPLDLEQY VQSENLSSGF EHDVKTDIFP SREVKLLHLF 240 FCSCVFLSML VLVPIDGFFW HRESSEHMYQ VVPLPPDSSL RTYTEEIPVK HSTSAAAETC 300 TYGDNGGKPS ISLKSETLST TPKAVACELT SQERDSALLR YKQKKKTRRY DKHIRYESRK 360 VRAESRVRVK GRFAKREQEH

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MNSEESQNSR PCDYCGHSTA LLYCRADSAK LCFSCDREVH STNQLFSKHT RTLLCDACDD  60
SPATILCSTD TSVFCQNCDW EKHNPSLSSL HQRRPLEGFS GCPSVSELFS ILGFPDVTKK  120
TLLSSPQGSA PYGFLGSEIE GLSDLFVWDS PSVVTLDDLI SSSASSHSFQ AMEVPPLPKN  180
RKAACGRHKE EILSQLRELA KSEPLDLEQY VQSENLSSGF EHDVKTDIFP SREVKLLHLF  240
FCSCVFLSML VLVPIDGFFW HRESSEHMYQ VVPLPPDSSL RTYTEEIPVK HSTSAAAETC  300
TYGDNGGKPS ISLKSETLST TPKAVACELT SQERDSALLR YKQKKKTRRY DKHIRYESRK  360
VRAESRVRVK GRFAKREQEH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	343	349	QKKKTRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.1	3e-90	CO-like family protein