PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX93197.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 245aa MW: 27476.4 Da PI: 5.0736 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.8 | 3.1e-19 | 53 | 104 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +++Wv+e+r+p + k++r++lg++ t+e+Aa+a++ a+++l+g RDX93197.1 53 PVYRGVRRRN-NNKWVCEVRVP---NdKSTRIWLGTYPTPEMAARAHDVAALALRG 104 68*****887.8*********9...6678*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MNILGESLDE SSNGCYSCSS PNTSHSDEEL HTLASAQPKK RAGRRIFKET RHPVYRGVRR 60 RNNNKWVCEV RVPNDKSTRI WLGTYPTPEM AARAHDVAAL ALRGKSACLN FADSAWRLPL 120 PASTNAKEIR RMAAEAAAAF AAEDSCGEQR NVNAVIDCEV SSSDVSVEED SNNSKALRGF 180 CYLDEITMPD SSGYEDNDMH EWLQSMANEP LRSPTFVTYV REWNFVEDDA EERSTKCTET 240 QTIRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63030.2 | 6e-41 | ERF family protein |