PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX91374.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 296aa    MW: 33939.1 Da    PI: 8.9731
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX91374.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF31.71.9e-101151344
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                i n+s+r++t+ kR++g  K   E+SvLC++e++ ii+ +++
  RDX91374.1 11 ITNDSKRKTTLRKRKTG-SKIIGEISVLCGVEACAIIYTPNN 51
                89***************.5999****************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MTRKKVDLAY ITNDSKRKTT LRKRKTGSKI IGEISVLCGV EACAIIYTPN NPHPEVWPSN  60
WGVQSVLSRF RGVSELEQSK KMLSQESFMR KKVIKAQEQL KKLKYENRKK EMTIHMFHHF  120
NGGNIFDNVN MIDLNDISYL IYQKLEEIKM NMNMIQAQEV TQVVENGGEI MTQGEQELLN  180
PVQGPETKLD DMQALNWFMD IINFGGDEDE MFTLEDVNVQ SKVSRTSRSS LNRPISHHQT  240
QAMHGLYYLT RRLTSMSTVL VILDWSSIHS VVVPTVKSFV KLQSIDLEIP GRPTGS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVDLAYITNDSKRKTTLRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.13e-41M-type_MADS family protein