PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX90732.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

TCP

Protein Properties

Length: 360aa MW: 40775.7 Da PI: 8.0401

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX90732.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	139.4	3e-43	112	256	3	135
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........ssssasec...eaesssssasnsssgka 90 k+drhski T++g+RdRR+Rls+e+a+rfF Lqd+LGfdk+skt+eWLl+qak +ik+l++ s+ss sec + ++++ ++ +++++ RDX90732.1 112 SKRDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVEWLLNQAKVEIKQLAREkssvggakSASSTSECegvSCLDEVVVSGVLNEEQE 210 69***********************************************************888887765555567766633333333332222222 PP TCP 91 aksaa.kskksqksaasalnlakesrakarararertrekmriknk 135 ++ + + + ++++++ + kesr+kar+rarertrekm+ + + RDX90732.1 211 REPHVkRRTTKVCRKSAFNPIGKESREKARERARERTREKMKSRRV 256 22222133333334444477778****************99866 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MYSSNTSLNG NDLISYPNQP FCFRPFSFES NPTNSSKEQS NSNYALPPTP PLSFVQSPFD 60 ENIFFEQHHD LLLLHQSLAD SGVFKNLDVA AEILPIPSPA TTMEHTPRKR SSKRDRHSKI 120 NTARGLRDRR MRLSLEVAKR FFGLQDMLGF DKASKTVEWL LNQAKVEIKQ LAREKSSVGG 180 AKSASSTSEC EGVSCLDEVV VSGVLNEEQE REPHVKRRTT KVCRKSAFNP IGKESREKAR 240 ERARERTREK MKSRRVLADP SNVNRLSSWN PFETVEDSAG TQSQSVNHPS LDMHLAEAEE 300 PASSHAKEHL GQVEDMAHED NSFVIMSKWN QIMFMTSLNN LQEKFRPWEN IGKPTTIPSD

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MYSSNTSLNG NDLISYPNQP FCFRPFSFES NPTNSSKEQS NSNYALPPTP PLSFVQSPFD  60
ENIFFEQHHD LLLLHQSLAD SGVFKNLDVA AEILPIPSPA TTMEHTPRKR SSKRDRHSKI  120
NTARGLRDRR MRLSLEVAKR FFGLQDMLGF DKASKTVEWL LNQAKVEIKQ LAREKSSVGG  180
AKSASSTSEC EGVSCLDEVV VSGVLNEEQE REPHVKRRTT KVCRKSAFNP IGKESREKAR  240
ERARERTREK MKSRRVLADP SNVNRLSSWN PFETVEDSAG TQSQSVNHPS LDMHLAEAEE  300
PASSHAKEHL GQVEDMAHED NSFVIMSKWN QIMFMTSLNN LQEKFRPWEN IGKPTTIPSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18550.1	2e-21	TCP family protein