PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX90260.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 488aa MW: 54256.2 Da PI: 6.4606

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX90260.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.1	8e-07	243	264	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H RDX90260.1 243 FCTICGKGFKRDANLRMHMRGH 264 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MDSNGSLRAN TWARPSSLTS PASGLSSDPL PFSSFGLQQN QHKWDDPSNS DYGIRAEASF 60 KEFNPASQTQ SPLPCNSNNE IEFTDQENCR PSESSHTSTL QDWDPSVMLN NLSFLEEKIH 120 QLQDLVHLIV RQKGSLLPSV RPNLINTSSL AEQIDQLRGT TVPSGTGASS SCVQLQNNSG 180 KQLSDQSMHT DLPNNCEMEQ NYNMVEHEFK DEEDADEGEN LAPGSYEILQ LEKEEILAPH 240 THFCTICGKG FKRDANLRMH MRGHGDEYKT AAALAKPHKE SGSPKLIKRY SCPYPGCKRN 300 KDHKKFQPLK TILCVKNHYK RTHCDKSYTC SRCNTKKFSV MADLKTHEKH CGKDKWLCSC 360 GTTFSRKDKL FGHIALFQGH TPAIPLDDNT KGVAEAPIHD SKENSKVGNM NFSFGSNPSN 420 ANGVQNVMDV KGNSDDPINY FSSLNFEANF GVFNEFTRPL FDDSEGSFSF VMPGSFKSGG 480 ESSSDNLL

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MDSNGSLRAN TWARPSSLTS PASGLSSDPL PFSSFGLQQN QHKWDDPSNS DYGIRAEASF  60
KEFNPASQTQ SPLPCNSNNE IEFTDQENCR PSESSHTSTL QDWDPSVMLN NLSFLEEKIH  120
QLQDLVHLIV RQKGSLLPSV RPNLINTSSL AEQIDQLRGT TVPSGTGASS SCVQLQNNSG  180
KQLSDQSMHT DLPNNCEMEQ NYNMVEHEFK DEEDADEGEN LAPGSYEILQ LEKEEILAPH  240
THFCTICGKG FKRDANLRMH MRGHGDEYKT AAALAKPHKE SGSPKLIKRY SCPYPGCKRN  300
KDHKKFQPLK TILCVKNHYK RTHCDKSYTC SRCNTKKFSV MADLKTHEKH CGKDKWLCSC  360
GTTFSRKDKL FGHIALFQGH TPAIPLDDNT KGVAEAPIHD SKENSKVGNM NFSFGSNPSN  420
ANGVQNVMDV KGNSDDPINY FSSLNFEANF GVFNEFTRPL FDDSEGSFSF VMPGSFKSGG  480
ESSSDNLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-154	C2H2 family protein