PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX89786.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | GRF | ||||||||
Protein Properties | Length: 414aa MW: 45894.4 Da PI: 8.1775 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 82 | 5.1e-26 | 179 | 222 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e RDX89786.1 179 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVE 222 79***************************************987 PP | |||||||
2 | QLQ | 52.1 | 2e-18 | 108 | 144 | 1 | 37 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+F+ +Q+q+L+ Q+l+++y++a++ vPpeLlq+i+k RDX89786.1 108 SYFSLSQWQELELQALIFRYMLAGAAVPPELLQPIRK 144 78*********************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 414 aa Download sequence |
MDFHLKQWRN QHESEEQHST KMPKLLPESH QEPQTQSSAS ALPLFVPEPN SKVSTLSDST 60 LATTTNRFPK KRNLLPPQPF FLWLLRFLSF FPFLGWSPLY YTCSGMGSYF SLSQWQELEL 120 QALIFRYMLA GAAVPPELLQ PIRKSLLHSP HYFLHHPLQH YQPASALLQS GYWGRGGMDP 180 EPGRCRRTDG KKWRCSRDVV AGQKYCERHM HRGRNRSRKP VELPTPSSAC GAGSLAPSSS 240 ISSPPLATAS LKSPFDLLHL NERSSGTKNE DKSLFENEDH VGGDGRSGGH MLRHFFDDWP 300 RSLQDSDNVE NNASRINSPT CLSISMPGNT SSDVSLKLST GYGEDPGPRN GNLDLEPEQL 360 QLNWAGGWAS ANQVASMGGP LAEALRSSTS TSSPTSVLHH LPRGSGSETS FIST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52910.1 | 1e-79 | GRF family protein |