PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX89786.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

GRF

Protein Properties

Length: 414aa MW: 45894.4 Da PI: 8.1775

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX89786.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	82	5.1e-26	179	222	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e RDX89786.1 179 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVE 222 79***************************************987 PP
2	QLQ	52.1	2e-18	108	144	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+F+ +Q+q+L+ Q+l+++y++a++ vPpeLlq+i+k RDX89786.1 108 SYFSLSQWQELELQALIFRYMLAGAAVPPELLQPIRK 144 78*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MDFHLKQWRN QHESEEQHST KMPKLLPESH QEPQTQSSAS ALPLFVPEPN SKVSTLSDST 60 LATTTNRFPK KRNLLPPQPF FLWLLRFLSF FPFLGWSPLY YTCSGMGSYF SLSQWQELEL 120 QALIFRYMLA GAAVPPELLQ PIRKSLLHSP HYFLHHPLQH YQPASALLQS GYWGRGGMDP 180 EPGRCRRTDG KKWRCSRDVV AGQKYCERHM HRGRNRSRKP VELPTPSSAC GAGSLAPSSS 240 ISSPPLATAS LKSPFDLLHL NERSSGTKNE DKSLFENEDH VGGDGRSGGH MLRHFFDDWP 300 RSLQDSDNVE NNASRINSPT CLSISMPGNT SSDVSLKLST GYGEDPGPRN GNLDLEPEQL 360 QLNWAGGWAS ANQVASMGGP LAEALRSSTS TSSPTSVLHH LPRGSGSETS FIST

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MDFHLKQWRN QHESEEQHST KMPKLLPESH QEPQTQSSAS ALPLFVPEPN SKVSTLSDST  60
LATTTNRFPK KRNLLPPQPF FLWLLRFLSF FPFLGWSPLY YTCSGMGSYF SLSQWQELEL  120
QALIFRYMLA GAAVPPELLQ PIRKSLLHSP HYFLHHPLQH YQPASALLQS GYWGRGGMDP  180
EPGRCRRTDG KKWRCSRDVV AGQKYCERHM HRGRNRSRKP VELPTPSSAC GAGSLAPSSS  240
ISSPPLATAS LKSPFDLLHL NERSSGTKNE DKSLFENEDH VGGDGRSGGH MLRHFFDDWP  300
RSLQDSDNVE NNASRINSPT CLSISMPGNT SSDVSLKLST GYGEDPGPRN GNLDLEPEQL  360
QLNWAGGWAS ANQVASMGGP LAEALRSSTS TSSPTSVLHH LPRGSGSETS FIST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	1e-79	GRF family protein