PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RDX89652.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 222aa MW: 25151.7 Da PI: 8.7378 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.8 | 2e-05 | 28 | 50 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C C+++Fs+ L+ H +H RDX89652.1 28 FRCRLCNRVFSTFQALTAHVESH 50 89*****************9998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 222 aa Download sequence |
MPMNANNIFN ISIFNSGQDP HQNNQNGFRC RLCNRVFSTF QALTAHVESH FVQENPIMRS 60 LYSPNHVNSQ REMIPNLLQP NFPRPMMVQE PRNLVNNRVF HAPPPQPMVM PRPRANSFSY 120 AIQQVVVASQ PLQGPPQAIL SAENNVAEMT RLLALPIHQR EMEVSPIDGT KPYINLLDKS 180 INNNRSFNRT IINGDISNLG NIDPTLKLPL YLNSESPIVD HV |