PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX88345.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 200aa MW: 21627.3 Da PI: 8.6915 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.9 | 8.1e-21 | 26 | 76 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr ++ +gr++AeIrdp gk++r++lg+f+taeeAa+a++aa+++++g+ RDX88345.1 26 RYRGVRKRP-WGRYAAEIRDP---GKKTRVWLGTFDTAEEAARAYDAAAREFRGA 76 59*******.**********8...557*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MAPRDRATAL AGPSPTAPAH NAKEIRYRGV RKRPWGRYAA EIRDPGKKTR VWLGTFDTAE 60 EAARAYDAAA REFRGAKAKT NFPTPSELII NTNTRSPSQS STLDTSSPPP LDLTLSPLSA 120 AAAGVGALPF PVARPVLFFD AFARADSMIA VARRDTCGFE CPVADFRQSD SDSYERRGLL 180 DLDLNVPPLP ETFGYAGDTI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15210.1 | 2e-27 | ERF family protein |